PLANT DNA MINI-PREP
A slight modification of the Dellaporta
technique (Plant Molecular Biology Reporter 1(4): 19
1. Immerse chopped plant material (approximately 2 g) in liquid
N2 then grind for 1 min. in a prechilled (with liquid N2) Waring
blender.
2. Transfer 1 g of resulting fine powder (still frozen) with
a prechilled spatula into a 50 ml Oak Ridge tube containing 16
ml of extraction buffer:
| To make 100 ml: | |
| 58 ml H2O | |
| 100 mM Tris pH 8 | 10 ml 1 M Tris, pH 8.0 |
| 50 mM EDTA pH 8 | 10 ml 0.5 M EDTA |
| 500 mM NaCl | 10 ml 5M NaCl |
| 10 mM b-Mercaptoethanol | 70 ml b-Mercaptoethanol |
| 1.25% SDS | 12 ml 10% SDS |
3. Mix thoroughly by vigorous shaking and place at 65°
for 10 minutes.
4. Add 5.0 ml 5 M Potassium acetate. Shake vigorously and incubate
at 0° for 20 min.
5. Spin tubes at 15000 rpm for 20 min. in the SS34 rotor. Collect
supernatant by pouring through a syringe that has a milipore apparatus
attached to it, which contains fine nylon mesh rather than a filter.
Collect the supernatant in a Oak Ridge tube containing 10 ml isopropanol.
Mix and incubate at -20° C for at least 30 min.
6. Pellet DNA at 15000 rpm for 15 min. Gently pour off supernatant
and lightly dry pellets by inverting the tubes on a paper towel
for 10 min.
7. Redissolve DNA pellets with 0.7 ml of 50 mM Tris, 10 mM
EDTA pH 8, transfer to a microfuge tube, and spin for 10 min.
to remove insoluble debris.
8. Transfer the supernatant to a new microfuge tube. and add 75 ml 3M Sodium acetate and 500 ml isopropanol. Mix well and pellet the clot for 30 seconds in a microfuge. Wash with 80% ethanol, dry and redissolve in 100 ml 10 mM Tris, 1 mM EDTA pH 8.